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AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein PEP1 (C8Z3X9)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C8Z3X9
- Type
- protein
- Length
- 1,577 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x496CaF2B08cCa4D5Bf26e23EDc205f4D74D7bD6b
- Molecule
- Vacuolar protein SORTING/TARGETING protein PEP1
- UniProt
- C8Z3X9
- Pockets
- 20 · best druggability 0.80
Structure
1 distinct chain · 11% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein PEP1 | protein | 1577 | 11% helix, 36% strand | C8Z3X9 |
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 688 | 0.80 | 0.84 | 73 | empty |
| 2 | 525 | 0.76 | 0.83 | 64 | empty |
| 3 | 639 | 0.74 | 0.80 | 65 | empty |
| 4 | 495 | 0.71 | 0.81 | 64 | empty |
| 5 | 222 | 0.67 | 0.85 | 39 | empty |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C8Z3X9
- Elsewhere: UniProt C8Z3X9 · AlphaFold DB C8Z3X9
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