Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein PEP1 (A6ZKT1)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6ZKT1
- Type
- protein
- Length
- 1,579 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- Vacuolar protein SORTING/TARGETING protein PEP1
- UniProt
- A6ZKT1
- Pockets
- 20 · best druggability 0.83
Structure
1 distinct chain · 9% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein PEP1 | protein | 1579 | 9% helix, 35% strand | A6ZKT1 |
Pockets
20 pockets found on a 1 Å grid, 12 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 604 | 0.83 | 0.88 | 93 | empty |
| 2 | 758 | 0.82 | 0.86 | 121 | empty |
| 3 | 844 | 0.81 | 0.83 | 87 | empty |
| 4 | 106 | 0.73 | 0.95 | 23 | empty |
| 5 | 322 | 0.72 | 0.85 | 42 | empty |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6ZKT1
- Elsewhere: UniProt A6ZKT1 · AlphaFold DB A6ZKT1
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