Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein PEP1 (C7GX93)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C7GX93
- Type
- protein
- Length
- 1,577 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa7e3031c43CB89a6785102a309F7e2b2e7370dBe
- Molecule
- Vacuolar protein SORTING/TARGETING protein PEP1
- UniProt
- C7GX93
- Pockets
- 20 · best druggability 0.85
Structure
1 distinct chain · 10% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein PEP1 | protein | 1577 | 10% helix, 36% strand | C7GX93 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 815 | 0.85 | 0.88 | 113 | empty |
| 2 | 1112 | 0.79 | 0.80 | 91 | empty |
| 3 | 1058 | 0.78 | 0.80 | 103 | empty |
| 4 | 105 | 0.74 | 0.95 | 23 | empty |
| 5 | 904 | 0.69 | 0.74 | 87 | empty |
Modifications
Observed in the structure: 17 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C7GX93
- Elsewhere: UniProt C7GX93 · AlphaFold DB C7GX93
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