Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein 10 (Q4P3I9)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4P3I9
- Type
- protein
- Length
- 1,506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x11Ee299A711966b8aD757D4cFC2c01135b4a9e44
- Molecule
- Vacuolar protein SORTING/TARGETING protein 10
- UniProt
- Q4P3I9
- Pockets
- 20 · best druggability 0.69
Structure
1 distinct chain · 9% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein 10 | protein | 1506 | 9% helix, 37% strand | Q4P3I9 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 342 | 0.69 | 0.82 | 35 | empty |
| 2 | 444 | 0.67 | 0.79 | 28 | empty |
| 3 | 361 | 0.62 | 0.78 | 35 | empty |
| 4 | 253 | 0.57 | 0.78 | 32 | empty |
| 5 | 305 | 0.56 | 0.76 | 28 | empty |
Modifications
Observed in the structure: 16 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4P3I9
- Elsewhere: UniProt Q4P3I9 · AlphaFold DB Q4P3I9
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