Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein 10 (C5GVC6)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5GVC6
- Type
- protein
- Length
- 1,500 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x366cE1f17013a0D1c76C8fF1195e460629Fd5dB4
- Molecule
- Vacuolar protein SORTING/TARGETING protein 10
- UniProt
- C5GVC6
- Pockets
- 17 · best druggability 0.82
Structure
1 distinct chain · 10% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein 10 | protein | 1500 | 10% helix, 37% strand | C5GVC6 |
Pockets
17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 979 | 0.82 | 0.84 | 90 | empty |
| 2 | 569 | 0.78 | 0.85 | 68 | empty |
| 3 | 977 | 0.78 | 0.80 | 84 | empty |
| 4 | 677 | 0.76 | 0.82 | 54 | empty |
| 5 | 68 | 0.73 | 0.98 | 24 | empty |
Modifications
Observed in the structure: 15 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5GVC6
- Elsewhere: UniProt C5GVC6 · AlphaFold DB C5GVC6
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