Research workbench
AlphaFold monomer V2.0 prediction for probable V-type proton ATPase 116 kda subunit a (P30628)
Analyse AlphaFold monomer V2.0 prediction for probable V-type proton ATPase 116 kda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P30628
- Type
- protein
- Length
- 905 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Probable V-type proton ATPase 116 kda subunit a
- UniProt
- P30628
- Pockets
- 15 · best druggability 0.70
Structure
1 distinct chain · 59% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable V-type proton ATPase 116 kda subunit a | protein | 905 | 59% helix, 9% strand | P30628 |
Pockets
15 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.70 | 0.96 | 22 | empty |
| 2 | 447 | 0.63 | 0.77 | 43 | empty |
| 3 | 371 | 0.56 | 0.74 | 32 | empty |
| 4 | 225 | 0.51 | 0.76 | 27 | empty |
| 5 | 174 | 0.48 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P30628
- Elsewhere: UniProt P30628 · AlphaFold DB P30628
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