Research workbench
AlphaFold monomer V2.0 prediction for protein vms-1 (P34511)
Analyse AlphaFold monomer V2.0 prediction for protein vms-1 (P34511) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P34511
- Type
- protein
- Length
- 618 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDC743587FCBF7fa9934EA80Fa8ee6DB1899C6b27
- Molecule
- Protein vms-1
- UniProt
- P34511
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 44% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein vms-1 | protein | 618 | 44% helix, 11% strand | P34511 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 715 | 0.66 | 0.75 | 64 | empty |
| 2 | 164 | 0.52 | 0.79 | 21 | empty |
| 3 | 64 | 0.43 | 0.81 | 12 | empty |
| 4 | 66 | 0.31 | 0.74 | 10 | empty |
| 5 | 62 | 0.28 | 0.73 | 7 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34511
- Elsewhere: UniProt P34511 · AlphaFold DB P34511
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