Research workbench
AlphaFold monomer V2.0 prediction for ABC transporter ATP-binding PROTEIN/PERMEASE VMR1 (P38735)
Analyse AlphaFold monomer V2.0 prediction for ABC transporter ATP-binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38735
- Type
- protein
- Length
- 1,592 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- ABC transporter ATP-binding PROTEIN/PERMEASE VMR1
- UniProt
- P38735
- Pockets
- 20 · best druggability 0.85
Structure
1 distinct chain · 61% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ABC transporter ATP-binding PROTEIN/PERMEASE VMR1 | protein | 1592 | 61% helix, 9% strand | P38735 |
Pockets
20 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 898 | 0.85 | 0.87 | 85 | empty |
| 2 | 961 | 0.72 | 0.76 | 68 | empty |
| 3 | 728 | 0.70 | 0.77 | 76 | empty |
| 4 | 504 | 0.66 | 0.77 | 46 | empty |
| 5 | 349 | 0.62 | 0.77 | 39 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38735
- Elsewhere: UniProt P38735 · AlphaFold DB P38735
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.