Research workbench
AlphaFold monomer V2.0 prediction for astacin-like metalloprotease toxin 5 (P0DM62)
Analyse AlphaFold monomer V2.0 prediction for astacin-like metalloprotease toxin 5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DM62
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Astacin-like metalloprotease toxin 5
- UniProt
- P0DM62
- Pockets
- 3 · best druggability 0.35
Structure
1 distinct chain · 31% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Astacin-like metalloprotease toxin 5 | protein | 186 | 31% helix, 19% strand | P0DM62 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.35 | 0.77 | 16 | empty |
| 2 | 64 | 0.28 | 0.73 | 15 | empty |
| 3 | 58 | 0.24 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DM62
- Elsewhere: UniProt P0DM62 · AlphaFold DB P0DM62
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