Research workbench
AlphaFold monomer V2.0 prediction for zinc metalloproteinase- disintegrin-like vlaip-B (Q4VM07)
Analyse AlphaFold monomer V2.0 prediction for zinc metalloproteinase- disintegrin-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4VM07
- Type
- protein
- Length
- 614 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeed72B55F0dD4B7707c70e598051F9ab5d1Eb12c
- Molecule
- Zinc metalloproteinase-disintegrin-like vlaip-B
- UniProt
- Q4VM07
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 19% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zinc metalloproteinase-disintegrin-like vlaip-B | protein | 614 | 19% helix, 26% strand | Q4VM07 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1133 | 0.82 | 0.83 | 112 | empty |
| 2 | 528 | 0.75 | 0.83 | 62 | empty |
| 3 | 236 | 0.61 | 0.81 | 26 | empty |
| 4 | 231 | 0.50 | 0.75 | 32 | empty |
| 5 | 81 | 0.31 | 0.73 | 17 | empty |
Modifications
Observed in the structure: 18 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4VM07
- Elsewhere: UniProt Q4VM07 · AlphaFold DB Q4VM07
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