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AlphaFold monomer V2.0 prediction for zinc metalloproteinase- disintegrin-like bothropasin (O93523)

Analyse AlphaFold monomer V2.0 prediction for zinc metalloproteinase- disintegrin-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O93523
Type: protein
Length: 610 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x696fbd2e2d1499E7c009274A815cA989Bda9ceaC
Molecule: Zinc metalloproteinase-disintegrin-like bothropasin
UniProt: O93523
Pockets: 10 · best druggability 0.65

Structure

1 distinct chain · 19% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Zinc metalloproteinase-disintegrin-like bothropasin	protein	610	19% helix, 26% strand	O93523

Pockets

10 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	590	0.65	0.76	43	empty
2	734	0.64	0.73	69	empty
3	296	0.63	0.80	49	empty
4	356	0.62	0.78	38	empty
5	61	0.58	0.90	21	empty

Modifications

Observed in the structure: 18 disulfide (disulfide).

Compared structures

3DSL · The Three-dimensional Structure of Bothropasin, the Main Hemorrhagic Factor from Bothrops… · an experimental structure of the same protein · chain A against A, TM-score 0.62
3DSL · The three-dimensional structure of bothropasin, the main hemorrhagic factor from bothrops… · an experimental structure of the same protein · chain A against A, TM-score 0.62

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O93523
Elsewhere: UniProt O93523 · AlphaFold DB O93523

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