Research workbench
AlphaFold monomer V2.0 prediction for snake venom metalloproteinase H4 (Q9IAY4)
Analyse AlphaFold monomer V2.0 prediction for snake venom metalloproteinase H4 (Q9IAY4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9IAY4
- Type
- protein
- Length
- 357 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Snake venom metalloproteinase H4
- UniProt
- Q9IAY4
- Pockets
- 7 · best druggability 0.58
Structure
1 distinct chain · 19% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Snake venom metalloproteinase H4 | protein | 357 | 19% helix, 31% strand | Q9IAY4 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 98 | 0.58 | 0.87 | 22 | empty |
| 2 | 254 | 0.54 | 0.76 | 37 | empty |
| 3 | 82 | 0.44 | 0.80 | 13 | empty |
| 4 | 71 | 0.35 | 0.77 | 15 | empty |
| 5 | 66 | 0.32 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9IAY4
- Elsewhere: UniProt Q9IAY4 · AlphaFold DB Q9IAY4
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