Research workbench
AlphaFold monomer V2.0 prediction for hth-type quorum sensing- dependent transcriptional regulator vjbr (Q2YJ50)
Analyse AlphaFold monomer V2.0 prediction for hth-type quorum sensing- dependent… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2YJ50
- Type
- protein
- Length
- 259 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Hth-type quorum sensing-dependent transcriptional regulator vjbr
- UniProt
- Q2YJ50
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hth-type quorum sensing-dependent transcriptional regulator vjbr | protein | 259 | 49% helix, 14% strand | Q2YJ50 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.79 | 0.97 | 24 | empty |
| 2 | 117 | 0.49 | 0.80 | 26 | empty |
| 3 | 59 | 0.30 | 0.75 | 18 | empty |
| 4 | 50 | 0.23 | 0.72 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YJ50
- Elsewhere: UniProt Q2YJ50 · AlphaFold DB Q2YJ50
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