Research workbench
AlphaFold monomer V2.0 prediction for type IV secretion system- coupling protein VIRD4 (Q6G2A8)
Analyse AlphaFold monomer V2.0 prediction for type IV secretion system- coupling… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6G2A8
- Type
- protein
- Length
- 639 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Type IV secretion system-coupling protein VIRD4
- UniProt
- Q6G2A8
- Pockets
- 8 · best druggability 0.55
Structure
1 distinct chain · 54% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type IV secretion system-coupling protein VIRD4 | protein | 639 | 54% helix, 12% strand | Q6G2A8 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 273 | 0.55 | 0.76 | 28 | empty |
| 2 | 74 | 0.45 | 0.82 | 19 | empty |
| 3 | 151 | 0.42 | 0.74 | 27 | empty |
| 4 | 53 | 0.39 | 0.81 | 13 | empty |
| 5 | 88 | 0.38 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6G2A8
- Elsewhere: UniProt Q6G2A8 · AlphaFold DB Q6G2A8
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