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AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB11 (Q8FXK7)

Analyse AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB11… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8FXK7
Type: protein
Length: 361 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
Molecule: Type IV secretion system protein VIRB11
UniProt: Q8FXK7
Pockets: 5 · best druggability 0.46

Structure

1 distinct chain · 35% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type IV secretion system protein VIRB11	protein	361	35% helix, 21% strand	Q8FXK7

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	116	0.46	0.79	23	empty
2	86	0.34	0.75	18	empty
3	57	0.29	0.75	13	empty
4	68	0.28	0.73	16	empty
5	57	0.27	0.73	14	empty

Compared structures

2GZA · Crystal structure of the VirB11 ATPase from the Brucella Suis type IV secretion system in… · an experimental structure of the same protein · chain A against C, TM-score 0.91
2GZA · Crystal structure of the VIRB11 ATPase from the brucella suis type IV secretion system in… · an experimental structure of the same protein · chain A against C, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8FXK7
Elsewhere: UniProt Q8FXK7 · AlphaFold DB Q8FXK7

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