Research workbench
AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB11 (P0C534)
Analyse AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB11… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C534
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Type IV secretion system protein VIRB11
- UniProt
- P0C534
- Pockets
- 4 · best druggability 0.47
Structure
1 distinct chain · 36% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type IV secretion system protein VIRB11 | protein | 362 | 36% helix, 21% strand | P0C534 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.47 | 0.79 | 20 | empty |
| 2 | 79 | 0.30 | 0.73 | 17 | empty |
| 3 | 53 | 0.25 | 0.73 | 16 | empty |
| 4 | 53 | 0.25 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C534
- Elsewhere: UniProt P0C534 · AlphaFold DB P0C534
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