Research workbench
AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB6 (Q9RND2)
Analyse AlphaFold monomer V2.0 prediction for type IV secretion system protein VIRB6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9RND2
- Type
- protein
- Length
- 321 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B9C1843C18E3Db57c90541Af4e30FE5153fE095
- Molecule
- Type IV secretion system protein VIRB6
- UniProt
- Q9RND2
- Pockets
- 3 · best druggability 0.57
Structure
1 distinct chain · 83% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type IV secretion system protein VIRB6 | protein | 321 | 83% helix, 0% strand | Q9RND2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 218 | 0.57 | 0.79 | 27 | empty |
| 2 | 155 | 0.48 | 0.77 | 20 | empty |
| 3 | 74 | 0.36 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RND2
- Elsewhere: UniProt Q9RND2 · AlphaFold DB Q9RND2
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