Research workbench
AlphaFold monomer V2.0 prediction for protein vernalization insensitive 3 (Q9FIE3)
Analyse AlphaFold monomer V2.0 prediction for protein vernalization insensitive 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FIE3
- Type
- protein
- Length
- 620 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x320d59A32cDD20f65Fd6bcCbb9bA5fcfE4Dd1A21
- Molecule
- Protein vernalization insensitive 3
- UniProt
- Q9FIE3
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 31% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein vernalization insensitive 3 | protein | 620 | 31% helix, 11% strand | Q9FIE3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 516 | 0.62 | 0.75 | 48 | empty |
| 2 | 68 | 0.34 | 0.77 | 12 | empty |
| 3 | 102 | 0.34 | 0.72 | 19 | empty |
| 4 | 68 | 0.29 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7OQV · Crystal structure of the polymerising VEL domain of VIN3 (I575D mutant) · an experimental structure of the same protein · chain A against CCC, TM-score 0.08
- 7O6U · Crystal structure of the VIN3 VEL polymerising domain (R554A R556D mutant) · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 7O6T · Crystal structure of the polymerising VEL domain of VIN3 (R556D I575D mutant) · an experimental structure of the same protein · chain A against A, TM-score 0.08
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FIE3
- Elsewhere: UniProt Q9FIE3 · AlphaFold DB Q9FIE3
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