Research workbench
AlphaFold monomer V2.0 prediction for transcription factor vib-1 (Q9C2N1)
Analyse AlphaFold monomer V2.0 prediction for transcription factor vib-1 (Q9C2N1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9C2N1
- Type
- protein
- Length
- 670 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4646f197d9d8E25cddf613E3d4a2609797139977
- Molecule
- Transcription factor vib-1
- UniProt
- Q9C2N1
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 2% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor vib-1 | protein | 670 | 2% helix, 17% strand | Q9C2N1 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.53 | 0.85 | 18 | empty |
| 2 | 85 | 0.51 | 0.83 | 20 | empty |
| 3 | 192 | 0.50 | 0.77 | 32 | empty |
| 4 | 52 | 0.35 | 0.79 | 13 | empty |
| 5 | 52 | 0.27 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C2N1
- Elsewhere: UniProt Q9C2N1 · AlphaFold DB Q9C2N1
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