Research workbench
AlphaFold monomer V2.0 prediction for vascular endothelial growth factor receptor 3 (P79701)
Analyse AlphaFold monomer V2.0 prediction for vascular endothelial growth factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P79701
- Type
- protein
- Length
- 1,379 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD7A12721F841109403a67A62cb1740320d8999f8
- Molecule
- Vascular endothelial growth factor receptor 3
- UniProt
- P79701
- Pockets
- 13 · best druggability 0.77
Structure
1 distinct chain · 17% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vascular endothelial growth factor receptor 3 | protein | 1379 | 17% helix, 31% strand | P79701 |
Pockets
13 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 979 | 0.77 | 0.80 | 88 | empty |
| 2 | 892 | 0.71 | 0.76 | 74 | empty |
| 3 | 117 | 0.67 | 0.90 | 27 | empty |
| 4 | 515 | 0.61 | 0.74 | 50 | empty |
| 5 | 182 | 0.52 | 0.78 | 25 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P79701
- Elsewhere: UniProt P79701 · AlphaFold DB P79701
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