Research workbench
AlphaFold monomer V2.0 prediction for vascular endothelial growth factor receptor 1 (Q8QHL3)
Analyse AlphaFold monomer V2.0 prediction for vascular endothelial growth factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8QHL3
- Type
- protein
- Length
- 1,327 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Vascular endothelial growth factor receptor 1
- UniProt
- Q8QHL3
- Pockets
- 10 · best druggability 0.71
Structure
1 distinct chain · 15% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vascular endothelial growth factor receptor 1 | protein | 1327 | 15% helix, 34% strand | Q8QHL3 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 749 | 0.71 | 0.77 | 61 | empty |
| 2 | 389 | 0.71 | 0.82 | 44 | empty |
| 3 | 123 | 0.64 | 0.87 | 18 | empty |
| 4 | 282 | 0.54 | 0.75 | 39 | empty |
| 5 | 82 | 0.37 | 0.76 | 17 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8QHL3
- Elsewhere: UniProt Q8QHL3 · AlphaFold DB Q8QHL3
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