Research workbench
AlphaFold monomer V2.0 prediction for virginiamycin B lyase (Q1B571)
Analyse AlphaFold monomer V2.0 prediction for virginiamycin B lyase (Q1B571) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1B571
- Type
- protein
- Length
- 280 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x61E65F88ec27E6A5EcEACd71FeF1FE2264bb3e71
- Molecule
- Virginiamycin B lyase
- UniProt
- Q1B571
- Pockets
- 2 · best druggability 0.65
Structure
1 distinct chain · 1% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Virginiamycin B lyase | protein | 280 | 1% helix, 53% strand | Q1B571 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 323 | 0.65 | 0.80 | 31 | empty |
| 2 | 77 | 0.30 | 0.72 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1B571
- Elsewhere: UniProt Q1B571 · AlphaFold DB Q1B571
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