Research workbench
AlphaFold monomer V2.0 prediction for virginiamycin B lyase (Q7W0D3)
Analyse AlphaFold monomer V2.0 prediction for virginiamycin B lyase (Q7W0D3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7W0D3
- Type
- protein
- Length
- 299 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Virginiamycin B lyase
- UniProt
- Q7W0D3
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 2% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Virginiamycin B lyase | protein | 299 | 2% helix, 50% strand | Q7W0D3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 447 | 0.70 | 0.81 | 35 | empty |
| 2 | 151 | 0.41 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7W0D3
- Elsewhere: UniProt Q7W0D3 · AlphaFold DB Q7W0D3
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