AlphaFold monomer V2.0 prediction for vitamin D3 receptor (P13053)

Structure

1 distinct chain · 49% helix, 4% strand (DSSP).

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Compared structures

• 5GIE · Crystal structure of VDR in complex with DLAM-4P (P21 form) · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3VT3 · Crystal structures of rat VDR-LBD with R270L mutation · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3VT3 · Crystal structures of rat vdr-lbd with R270L mutation · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 1RKG · Crystal structure of the rat vitamin D receptor ligand binding domain complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 1RKG · crystal structure of the rat vitamin D receptor ligand binding domain complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0I · Crystal structure of rat vdr ligand binding domain in complex with novel nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0I · Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0G · Crystal structure of rat vdr ligand binding domain in complex with novel nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0G · Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0J · Crystal structure of rat vdr ligand binding domain in complex with novel nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 3W0J · Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal… · an experimental structure of the same protein · chain A against A, TM-score 0.56
• 2ZMI · Crystal structure of rat vitamin D receptor bound to adamantyl vitamin D analogs… · an experimental structure of the same protein · chain A against A, TM-score 0.56

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P13053
• Elsewhere: UniProt P13053 · AlphaFold DB P13053