Research workbench
AlphaFold monomer V2.0 prediction for violaxanthin de-epoxidase, chloroplastic (Q40251)
Analyse AlphaFold monomer V2.0 prediction for violaxanthin de-epoxidase, chloroplastic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q40251
- Type
- protein
- Length
- 473 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Violaxanthin de-epoxidase, chloroplastic
- UniProt
- Q40251
- Pockets
- 4 · best druggability 0.82
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Violaxanthin de-epoxidase, chloroplastic | protein | 473 | 41% helix, 19% strand | Q40251 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1098 | 0.82 | 0.82 | 68 | empty |
| 2 | 112 | 0.41 | 0.76 | 13 | empty |
| 3 | 61 | 0.33 | 0.77 | 15 | empty |
| 4 | 59 | 0.28 | 0.74 | 19 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q40251
- Elsewhere: UniProt Q40251 · AlphaFold DB Q40251
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.