Research workbench

AlphaFold monomer V2.0 prediction for vacuolar calcium ion transporter (Q99385)

Analyse AlphaFold monomer V2.0 prediction for vacuolar calcium ion transporter (Q99385) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q99385
Type: protein
Length: 411 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
Molecule: Vacuolar calcium ion transporter
UniProt: Q99385
Pockets: 4 · best druggability 0.83

Structure

1 distinct chain · 78% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vacuolar calcium ion transporter	protein	411	78% helix, 1% strand	Q99385

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	799	0.83	0.86	73	empty
2	245	0.50	0.75	25	empty
3	105	0.48	0.80	22	empty
4	72	0.35	0.77	15	empty

Compared structures

4K1C · VCX1 Calcium/Proton Exchanger · an experimental structure of the same protein · chain A against A, TM-score 0.89
4K1C · VCX1 CALCIUM/PROTON exchanger · an experimental structure of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99385
Elsewhere: UniProt Q99385 · AlphaFold DB Q99385

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