Research workbench
AlphaFold monomer V2.0 prediction for deubiquitinating protein VCPIP1 (Q8CDG3)
Analyse AlphaFold monomer V2.0 prediction for deubiquitinating protein VCPIP1 (Q8CDG3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8CDG3
- Type
- protein
- Length
- 1,220 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4B52824A4D328C948b0b9091b60434807b691D00
- Molecule
- Deubiquitinating protein VCPIP1
- UniProt
- Q8CDG3
- Pockets
- 11 · best druggability 0.77
Structure
1 distinct chain · 29% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deubiquitinating protein VCPIP1 | protein | 1220 | 29% helix, 14% strand | Q8CDG3 |
Pockets
11 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 803 | 0.77 | 0.81 | 78 | empty |
| 2 | 863 | 0.75 | 0.79 | 69 | empty |
| 3 | 908 | 0.72 | 0.76 | 78 | empty |
| 4 | 413 | 0.64 | 0.78 | 47 | empty |
| 5 | 187 | 0.55 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8CDG3
- Elsewhere: UniProt Q8CDG3 · AlphaFold DB Q8CDG3
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