Research workbench
AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit B 2 (Q38680)
Analyse AlphaFold monomer V2.0 prediction for V-type proton ATPase subunit B 2 (Q38680) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q38680
- Type
- protein
- Length
- 492 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- V-type proton ATPase subunit B 2
- UniProt
- Q38680
- Pockets
- 6 · best druggability 0.53
Structure
1 distinct chain · 39% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type proton ATPase subunit B 2 | protein | 492 | 39% helix, 23% strand | Q38680 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 173 | 0.53 | 0.79 | 21 | empty |
| 2 | 262 | 0.50 | 0.74 | 36 | empty |
| 3 | 128 | 0.43 | 0.76 | 23 | empty |
| 4 | 65 | 0.36 | 0.77 | 15 | empty |
| 5 | 71 | 0.32 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q38680
- Elsewhere: UniProt Q38680 · AlphaFold DB Q38680
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