Research workbench
AlphaFold monomer V2.0 prediction for V-type ATP synthase alpha chain (Q9PK85)
Analyse AlphaFold monomer V2.0 prediction for V-type ATP synthase alpha chain (Q9PK85) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PK85
- Type
- protein
- Length
- 591 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- V-type ATP synthase alpha chain
- UniProt
- Q9PK85
- Pockets
- 10 · best druggability 0.66
Structure
1 distinct chain · 35% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type ATP synthase alpha chain | protein | 591 | 35% helix, 27% strand | Q9PK85 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 326 | 0.66 | 0.81 | 30 | empty |
| 2 | 111 | 0.54 | 0.83 | 21 | empty |
| 3 | 134 | 0.51 | 0.80 | 22 | empty |
| 4 | 123 | 0.48 | 0.79 | 23 | empty |
| 5 | 89 | 0.45 | 0.80 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PK85
- Elsewhere: UniProt Q9PK85 · AlphaFold DB Q9PK85
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