Research workbench
AlphaFold monomer V2.0 prediction for V-type proton ATPase catalytic subunit a (P38078)
Analyse AlphaFold monomer V2.0 prediction for V-type proton ATPase catalytic subunit a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38078
- Type
- protein
- Length
- 1,088 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- V-type proton ATPase catalytic subunit a
- UniProt
- P38078
- Pockets
- 10 · best druggability 0.71
Structure
1 distinct chain · 33% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type proton ATPase catalytic subunit a | protein | 1088 | 33% helix, 30% strand | P38078 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 487 | 0.71 | 0.80 | 46 | empty |
| 2 | 561 | 0.65 | 0.76 | 81 | empty |
| 3 | 412 | 0.58 | 0.75 | 38 | empty |
| 4 | 274 | 0.57 | 0.77 | 28 | empty |
| 5 | 229 | 0.51 | 0.76 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38078
- Elsewhere: UniProt P38078 · AlphaFold DB P38078
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