Research workbench
AlphaFold monomer V2.0 prediction for endoribonuclease vapd 1 (O85172)
Analyse AlphaFold monomer V2.0 prediction for endoribonuclease vapd 1 (O85172) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O85172
- Type
- protein
- Length
- 89 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0A70d3367d1cE30ff1149924db0112B10f5dbed3
- Molecule
- Endoribonuclease vapd 1
- UniProt
- O85172
- Pockets
- 1 · best druggability 0.61
Structure
1 distinct chain · 51% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endoribonuclease vapd 1 | protein | 89 | 51% helix, 4% strand | O85172 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 259 | 0.61 | 0.80 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O85172
- Elsewhere: UniProt O85172 · AlphaFold DB O85172
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