Research workbench
AlphaFold monomer V2.0 prediction for vacuolar protein 8 (P0CM60)
Analyse AlphaFold monomer V2.0 prediction for vacuolar protein 8 (P0CM60) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CM60
- Type
- protein
- Length
- 630 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd5D50E4286b9B87C5dF2784072003f42A40e81AA
- Molecule
- Vacuolar protein 8
- UniProt
- P0CM60
- Pockets
- 4 · best druggability 0.55
Structure
1 distinct chain · 63% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein 8 | protein | 630 | 63% helix, 0% strand | P0CM60 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 300 | 0.55 | 0.76 | 45 | empty |
| 2 | 93 | 0.49 | 0.82 | 16 | empty |
| 3 | 102 | 0.38 | 0.75 | 15 | empty |
| 4 | 63 | 0.35 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CM60
- Elsewhere: UniProt P0CM60 · AlphaFold DB P0CM60
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