Research workbench

AlphaFold monomer V2.0 prediction for venom allergen 5 (Q05110)

Analyse AlphaFold monomer V2.0 prediction for venom allergen 5 (Q05110) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q05110
Type: protein
Length: 227 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x3F7c838ccc23133e72aA1c8841D2c157C4B4810a
Molecule: Venom allergen 5
UniProt: Q05110
Pockets: 2 · best druggability 0.51

Structure

1 distinct chain · 30% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Venom allergen 5	protein	227	30% helix, 19% strand	Q05110

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	238	0.51	0.76	24	empty
2	73	0.35	0.76	16	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1QNX · Ves V 5, an allergen from vespula vulgaris venom · an experimental structure of the same protein · chain A against A, TM-score 0.91
1QNX · Ves v 5, an allergen from Vespula vulgaris venom · an experimental structure of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q05110
Elsewhere: UniProt Q05110 · AlphaFold DB Q05110

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