Research workbench
AlphaFold monomer V2.0 prediction for mannonate dehydratase (A4VVI4)
Analyse AlphaFold monomer V2.0 prediction for mannonate dehydratase (A4VVI4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4VVI4
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB667305a726a7bBE479c2c6ee2aeD6c760a09F1c
- Molecule
- Mannonate dehydratase
- UniProt
- A4VVI4
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 37% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mannonate dehydratase | protein | 366 | 37% helix, 17% strand | A4VVI4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 417 | 0.69 | 0.81 | 41 | empty |
| 2 | 71 | 0.36 | 0.77 | 12 | empty |
| 3 | 67 | 0.34 | 0.76 | 17 | empty |
Compared structures
- 3BDK · Crystal structure of streptococcus suis mannonate dehydratase complexed with substrate… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3BDK · Crystal Structure of Streptococcus suis mannonate dehydratase complexed with substrate… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3BAN · The crystal structure of mannonate dehydratase from Streptococcus suis serotype2 · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3FVM · Crystal structure of steptococcus suis mannonate dehydratase with metal mn++ · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3FVM · Crystal structure of Steptococcus suis mannonate dehydratase with metal Mn++ · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3BAN · The crystal structure of mannonate dehydratase from streptococcus suis SEROTYPE2 · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3DBN · Crystal structure of the streptoccocus suis SEROTYPE2 D- mannonate dehydratase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3DBN · Crystal structure of the Streptoccocus suis serotype2 D-mannonate dehydratase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4VVI4
- Elsewhere: UniProt A4VVI4 · AlphaFold DB A4VVI4
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