Research workbench
AlphaFold monomer V2.0 prediction for ultraviolet-B receptor UVR8 (Q9FN03)
Analyse AlphaFold monomer V2.0 prediction for ultraviolet-B receptor UVR8 (Q9FN03) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FN03
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb6e7C4580fc3C8083C98E2C233D8361824758CA3
- Molecule
- Ultraviolet-B receptor UVR8
- UniProt
- Q9FN03
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 5% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ultraviolet-B receptor UVR8 | protein | 440 | 5% helix, 38% strand | Q9FN03 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 443 | 0.75 | 0.84 | 45 | empty |
| 2 | 235 | 0.58 | 0.79 | 32 | empty |
| 3 | 67 | 0.42 | 0.81 | 18 | empty |
Compared structures
- 4D9S · Crystal structure of arabidopsis thaliana UVR8 (UV resistance locus 8) · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 4D9S · Crystal structure of Arabidopsis thaliana UVR8 (UV Resistance locus 8) · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 8GQE · Crystal structure of the W285A mutant of UVR8 in complex with RUP2 · an experimental structure of the same protein · chain A against B, TM-score 0.86
- 7VGG · Cryo-EM structure of Ultraviolet-B activated UVR8 in complex with COP1 · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 7VGG · Cryo-EM structure of ultraviolet-B activated UVR8 in complex with COP1 · an experimental structure of the same protein · chain A against B, TM-score 0.84
- 4DNU · Crystal structure of the W285A mutant of UVB-resistance protein UVR8 · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 4DNU · Crystal structure of the W285A mutant of uvb-resistance protein UVR8 · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 6XZL · Arabidopsis UV-B photoreceptor UVR8 mutant D96N D107N · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 6XZL · Arabidopsis UV-B photoreceptor UVR8 mutant D96N D107N · an experimental structure of the same protein · chain A against A, TM-score 0.84
- 4DNW · Crystal structure of UVB-resistance protein UVR8 · an experimental structure of the same protein · chain A against B, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FN03
- Elsewhere: UniProt Q9FN03 · AlphaFold DB Q9FN03
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