Research workbench
AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated protein 25 (C1G2D1)
Analyse AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1G2D1
- Type
- protein
- Length
- 735 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x42dD77B72587842B0D45dDAfeE209818D57836d0
- Molecule
- U3 small nucleolar RNA-associated protein 25
- UniProt
- C1G2D1
- Pockets
- 15 · best druggability 0.75
Structure
1 distinct chain · 38% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U3 small nucleolar RNA-associated protein 25 | protein | 735 | 38% helix, 12% strand | C1G2D1 |
Pockets
15 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 417 | 0.75 | 0.85 | 30 | empty |
| 2 | 815 | 0.73 | 0.77 | 51 | empty |
| 3 | 207 | 0.62 | 0.82 | 24 | empty |
| 4 | 454 | 0.62 | 0.76 | 32 | empty |
| 5 | 319 | 0.61 | 0.78 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1G2D1
- Elsewhere: UniProt C1G2D1 · AlphaFold DB C1G2D1
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