Research workbench
AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated protein 25 (A4R0E6)
Analyse AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4R0E6
- Type
- protein
- Length
- 722 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- U3 small nucleolar RNA-associated protein 25
- UniProt
- A4R0E6
- Pockets
- 13 · best druggability 0.78
Structure
1 distinct chain · 36% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U3 small nucleolar RNA-associated protein 25 | protein | 722 | 36% helix, 13% strand | A4R0E6 |
Pockets
13 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1018 | 0.78 | 0.80 | 85 | empty |
| 2 | 582 | 0.66 | 0.76 | 52 | empty |
| 3 | 232 | 0.61 | 0.81 | 31 | empty |
| 4 | 163 | 0.49 | 0.77 | 23 | empty |
| 5 | 157 | 0.46 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4R0E6
- Elsewhere: UniProt A4R0E6 · AlphaFold DB A4R0E6
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