Research workbench
AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated protein 25 (C5M3P0)
Analyse AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5M3P0
- Type
- protein
- Length
- 710 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- U3 small nucleolar RNA-associated protein 25
- UniProt
- C5M3P0
- Pockets
- 11 · best druggability 0.78
Structure
1 distinct chain · 39% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U3 small nucleolar RNA-associated protein 25 | protein | 710 | 39% helix, 13% strand | C5M3P0 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 945 | 0.78 | 0.80 | 73 | empty |
| 2 | 543 | 0.69 | 0.79 | 59 | empty |
| 3 | 344 | 0.65 | 0.80 | 36 | empty |
| 4 | 105 | 0.51 | 0.82 | 21 | empty |
| 5 | 130 | 0.48 | 0.78 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5M3P0
- Elsewhere: UniProt C5M3P0 · AlphaFold DB C5M3P0
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