Research workbench
AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated protein 25 (D4AUV1)
Analyse AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D4AUV1
- Type
- protein
- Length
- 717 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- U3 small nucleolar RNA-associated protein 25
- UniProt
- D4AUV1
- Pockets
- 11 · best druggability 0.74
Structure
1 distinct chain · 38% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U3 small nucleolar RNA-associated protein 25 | protein | 717 | 38% helix, 13% strand | D4AUV1 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1018 | 0.74 | 0.77 | 78 | empty |
| 2 | 279 | 0.63 | 0.81 | 36 | empty |
| 3 | 383 | 0.63 | 0.78 | 52 | empty |
| 4 | 313 | 0.59 | 0.77 | 37 | empty |
| 5 | 313 | 0.54 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D4AUV1
- Elsewhere: UniProt D4AUV1 · AlphaFold DB D4AUV1
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