Research workbench
AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated protein 25 (C5GAH0)
Analyse AlphaFold monomer V2.0 prediction for U3 small nucleolar RNA- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5GAH0
- Type
- protein
- Length
- 680 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- U3 small nucleolar RNA-associated protein 25
- UniProt
- C5GAH0
- Pockets
- 11 · best druggability 0.76
Structure
1 distinct chain · 40% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | U3 small nucleolar RNA-associated protein 25 | protein | 680 | 40% helix, 13% strand | C5GAH0 |
Pockets
11 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.76 | 0.78 | 81 | empty |
| 2 | 759 | 0.75 | 0.80 | 62 | empty |
| 3 | 467 | 0.65 | 0.78 | 35 | empty |
| 4 | 321 | 0.62 | 0.78 | 45 | empty |
| 5 | 102 | 0.57 | 0.85 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5GAH0
- Elsewhere: UniProt C5GAH0 · AlphaFold DB C5GAH0
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