Research workbench
AlphaFold monomer V2.0 prediction for udp-sugar pyrophosphorylase (A2YGP6)
Analyse AlphaFold monomer V2.0 prediction for udp-sugar pyrophosphorylase (A2YGP6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A2YGP6
- Type
- protein
- Length
- 616 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE4e5409cB506845d70744D216Bfd0506C6207BD9
- Molecule
- Udp-sugar pyrophosphorylase
- UniProt
- A2YGP6
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Udp-sugar pyrophosphorylase | protein | 616 | 35% helix, 25% strand | A2YGP6 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 861 | 0.71 | 0.76 | 76 | empty |
| 2 | 348 | 0.64 | 0.79 | 32 | empty |
| 3 | 104 | 0.43 | 0.78 | 20 | empty |
| 4 | 61 | 0.41 | 0.81 | 16 | empty |
| 5 | 51 | 0.35 | 0.79 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A2YGP6
- Elsewhere: UniProt A2YGP6 · AlphaFold DB A2YGP6
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