Research workbench
AlphaFold monomer V2.0 prediction for protein ultraspiracle (P20153)
Analyse AlphaFold monomer V2.0 prediction for protein ultraspiracle (P20153) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P20153
- Type
- protein
- Length
- 508 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x41DAc1610BdbAC0b3d8730e65e31b2a34f5a1627
- Molecule
- Protein ultraspiracle
- UniProt
- P20153
- Pockets
- 3 · best druggability 0.85
Structure
1 distinct chain · 41% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein ultraspiracle | protein | 508 | 41% helix, 3% strand | P20153 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 496 | 0.85 | 0.91 | 52 | empty |
| 2 | 345 | 0.63 | 0.78 | 35 | empty |
| 3 | 132 | 0.44 | 0.77 | 22 | empty |
Compared structures
- 1HG4 · Ultraspiracle ligand binding domain from drosophila melanogaster · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 1HG4 · Ultraspiracle ligand binding domain from Drosophila melanogaster · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 2HAN · Structural basis of heterodimeric ecdysteroid receptor interaction with natural response… · an experimental structure of the same protein · chain A against A, TM-score 0.15
- 2HAN · Structural basis of heterodimeric ecdysteroid receptor interaction with natural response… · an experimental structure of the same protein · chain A against A, TM-score 0.15
- 1R0O · Crystal structure of the heterodimeric ecdysone receptor DNA-binding complex · an experimental structure of the same protein · chain A against A, TM-score 0.15
- 1R0O · Crystal Structure of the Heterodimeric Ecdysone Receptor DNA-binding Complex · an experimental structure of the same protein · chain A against A, TM-score 0.15
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20153
- Elsewhere: UniProt P20153 · AlphaFold DB P20153
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