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AlphaFold monomer V2.0 prediction for salivary plasminogen activator alpha 1 (P98119)

Analyse AlphaFold monomer V2.0 prediction for salivary plasminogen activator alpha 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P98119
Type: protein
Length: 477 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf1a8F1556714059A77767ecA75A15ac431c60971
Molecule: Salivary plasminogen activator alpha 1
UniProt: P98119
Pockets: 6 · best druggability 0.66

Structure

1 distinct chain · 6% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Salivary plasminogen activator alpha 1	protein	477	6% helix, 32% strand	P98119

Pockets

6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	138	0.66	0.88	25	empty
2	251	0.55	0.77	34	empty
3	118	0.54	0.82	19	empty
4	304	0.51	0.73	39	empty
5	144	0.46	0.77	28	empty

Modifications

Observed in the structure: 14 disulfide (disulfide).

Compared structures

1A5I · Catalytic domain of vampire bat (desmodus rotundus) saliva plasminogen activator in… · an experimental structure of the same protein · chain A against A, TM-score 0.55
1A5I · Catalytic domain of vampire bat (desmodus rotundus) saliva plasminogen activator in… · an experimental structure of the same protein · chain A against A, TM-score 0.55

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P98119
Elsewhere: UniProt P98119 · AlphaFold DB P98119

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