Research workbench
AlphaFold monomer V2.0 prediction for UTP:RNA uridylyltransferase 1 (O64642)
Analyse AlphaFold monomer V2.0 prediction for UTP:RNA uridylyltransferase 1 (O64642) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O64642
- Type
- protein
- Length
- 764 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- UTP:RNA uridylyltransferase 1
- UniProt
- O64642
- Pockets
- 9 · best druggability 0.67
Structure
1 distinct chain · 27% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UTP:RNA uridylyltransferase 1 | protein | 764 | 27% helix, 7% strand | O64642 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 765 | 0.67 | 0.75 | 62 | empty |
| 2 | 376 | 0.66 | 0.80 | 39 | empty |
| 3 | 330 | 0.56 | 0.75 | 33 | empty |
| 4 | 139 | 0.47 | 0.78 | 17 | empty |
| 5 | 153 | 0.42 | 0.74 | 28 | empty |
Compared structures
- 7XS4 · Crystal structure of URT1 in complex with AAAU RNA · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 6L3F · The structure of UTP:RNA uridylyltransferase 1 (URT1) in in arabidopsis · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 6L3F · The structure of UTP:RNA uridylyltransferase 1 (URT1) in in Arabidopsis · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 6L8K · Structure of URT1 in complex with UTP · an experimental structure of the same protein · chain A against A, TM-score 0.41
- 6L8K · Structure of URT1 in complex with UTP · an experimental structure of the same protein · chain A against A, TM-score 0.41
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O64642
- Elsewhere: UniProt O64642 · AlphaFold DB O64642
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