Research workbench

AlphaFold monomer V2.0 prediction for pre-mRNA-splicing factor URN1 (Q06525)

Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing factor URN1 (Q06525) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q06525
Type: protein
Length: 465 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x632101649E208e9BB842605138AfB7073cbac29F
Molecule: Pre-mRNA-splicing factor URN1
UniProt: Q06525
Pockets: 3 · best druggability 0.55

Structure

1 distinct chain · 45% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pre-mRNA-splicing factor URN1	protein	465	45% helix, 7% strand	Q06525

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	255	0.55	0.76	22	empty
2	103	0.36	0.74	17	empty
3	55	0.32	0.77	13	empty

Compared structures

2JUC · URN1 FF domain yeast · an experimental structure of the same protein · chain A against A, TM-score 0.11
2JUC · URN1 ff domain yeast · an experimental structure of the same protein · chain A against A, TM-score 0.11

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q06525
Elsewhere: UniProt Q06525 · AlphaFold DB Q06525

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.