Research workbench
AlphaFold monomer V2.0 prediction for urease accessory protein ured (P42888)
Analyse AlphaFold monomer V2.0 prediction for urease accessory protein ured (P42888) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P42888
- Type
- protein
- Length
- 277 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x429aA010A80A47FF4a2777bB34A2bba144d19df2
- Molecule
- Urease accessory protein ured
- UniProt
- P42888
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 14% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Urease accessory protein ured | protein | 277 | 14% helix, 49% strand | P42888 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.65 | 0.90 | 24 | empty |
| 2 | 92 | 0.42 | 0.78 | 13 | empty |
| 3 | 141 | 0.40 | 0.74 | 26 | empty |
| 4 | 50 | 0.27 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42888
- Elsewhere: UniProt P42888 · AlphaFold DB P42888
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