Research workbench

AlphaFold monomer V2.0 prediction for uracil permease (P0AGM7)

Analyse AlphaFold monomer V2.0 prediction for uracil permease (P0AGM7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P0AGM7
Type: protein
Length: 429 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x96866709400bDEC5E64A979bc39b7c7eaab0b039
Molecule: Uracil permease
UniProt: P0AGM7
Pockets: 5 · best druggability 0.61

Structure

1 distinct chain · 69% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uracil permease	protein	429	69% helix, 4% strand	P0AGM7

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	211	0.61	0.82	33	empty
2	89	0.48	0.81	23	empty
3	81	0.43	0.79	18	empty
4	103	0.40	0.76	18	empty
5	71	0.30	0.73	17	empty

Compared structures

8OMZ · Wide inward-open unliganded UraA in complex with a conformation-selective synthetic… · an experimental structure of the same protein · chain A against A, TM-score 0.87
3QE7 · Crystal Structure of Uracil Transporter--UraA · an experimental structure of the same protein · chain A against A, TM-score 0.80
3QE7 · Crystal structure of uracil transporter--uraa · an experimental structure of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0AGM7
Elsewhere: UniProt P0AGM7 · AlphaFold DB P0AGM7

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