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AlphaFold monomer V2.0 prediction for DITRANS,POLYCIS-undecaprenyl- diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) (O82827)

Analyse AlphaFold monomer V2.0 prediction for DITRANS,POLYCIS-undecaprenyl- diphosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O82827
Type: protein
Length: 249 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9073C46348542FfE4327c3F363F9B51B22058e75
Molecule: DITRANS,POLYCIS-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)
UniProt: O82827
Pockets: 2 · best druggability 0.73

Structure

1 distinct chain · 48% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DITRANS,POLYCIS-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)	protein	249	48% helix, 12% strand	O82827

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	232	0.73	0.88	29	empty
2	69	0.30	0.74	16	empty

Compared structures

1F75 · Crystal structure of undecaprenyl diphosphate synthase from micrococcus luteus B-P 26 · an experimental structure of the same protein · chain A against A, TM-score 0.85
1F75 · Crystal structure of undecaprenyl diphosphate synthase from micrococcus luteus B-P 26 · an experimental structure of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O82827
Elsewhere: UniProt O82827 · AlphaFold DB O82827

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