Research workbench
AlphaFold monomer V2.0 prediction for TRITRANS,POLYCIS-undecaprenyl- diphosphate synthase (geranylgeranyl-diphosphate specific) (Q5V1I1)
Analyse AlphaFold monomer V2.0 prediction for TRITRANS,POLYCIS-undecaprenyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5V1I1
- Type
- protein
- Length
- 304 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- TRITRANS,POLYCIS-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific)
- UniProt
- Q5V1I1
- Pockets
- 2 · best druggability 0.78
Structure
1 distinct chain · 61% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRITRANS,POLYCIS-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) | protein | 304 | 61% helix, 12% strand | Q5V1I1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 342 | 0.78 | 0.88 | 35 | empty |
| 2 | 144 | 0.48 | 0.78 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5V1I1
- Elsewhere: UniProt Q5V1I1 · AlphaFold DB Q5V1I1
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