Research workbench
AlphaFold monomer V2.0 prediction for undecaprenyl-diphosphatase (B5YR97)
Analyse AlphaFold monomer V2.0 prediction for undecaprenyl-diphosphatase (B5YR97) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YR97
- Type
- protein
- Length
- 273 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5Ed6b66622087Dc1983A2090Bc20a6F5E42E57c1
- Molecule
- Undecaprenyl-diphosphatase
- UniProt
- B5YR97
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 74% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Undecaprenyl-diphosphatase | protein | 273 | 74% helix, 1% strand | B5YR97 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 764 | 0.78 | 0.82 | 53 | empty |
| 2 | 100 | 0.42 | 0.78 | 19 | empty |
| 3 | 62 | 0.33 | 0.75 | 14 | empty |
| 4 | 52 | 0.25 | 0.73 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YR97
- Elsewhere: UniProt B5YR97 · AlphaFold DB B5YR97
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